1. 25 Nov, 2018 1 commit
  2. 19 Nov, 2018 1 commit
  3. 16 Nov, 2018 1 commit
  4. 15 Nov, 2018 1 commit
  5. 25 Sep, 2018 1 commit
  6. 24 Sep, 2018 1 commit
  7. 14 Aug, 2018 2 commits
  8. 12 Aug, 2018 2 commits
    • Khalid Kunji's avatar
      Update README.md · 1d97db32
      Khalid Kunji authored
      1d97db32
    • ehsan's avatar
      Fixed input and output file formats. · 46bd2e24
      ehsan authored
       * Dense genotype file must have SNP names as first column.
       * Dense genotype file header must repeat individual id twice (one for each genotype)
       * Wide2Long utility has been updated to follow the above format.
       * Wide2Long utility writes dummy SNP names.
       * Output files contain SNP names as the first column.
      46bd2e24
  9. 27 Feb, 2018 1 commit
  10. 26 Feb, 2018 4 commits
  11. 20 Feb, 2018 1 commit
  12. 04 Feb, 2018 1 commit
  13. 31 Jan, 2018 1 commit
    • ehsan's avatar
      * Seed of random number generator is reset before processing each dense marker... · a7530e32
      ehsan authored
      * Seed of random number generator is reset before processing each dense marker to ensure reproducibility of results for different number of threads with the same seed value.
      * Meiosis probability calculation is fixed for the dense markers having a single flanking marker appearing after the dense markers.
      * Genotype calling thresholds are now compared as >= (previously >) to provide support for calling certain genotypes using method 2 with first threshold value of 1.
      * Probability of genotypes was not exported to the output probability file.
      a7530e32
  14. 29 Jan, 2018 1 commit